Gene detail information of Glyur000046s00004796.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43600.1 | 0 | ureidoglycolate amidohydrolase |
| NR | XP_004495345.1 | 0 | PREDICTED: N-carbamoyl-L-amino acid hydrolase-like [Cicer arietinum] |
| COG | YP_003685173.1 | 2.00E-150 | amidase [Meiothermus silvanus DSM 9946] |
| Swissprot | tr|Q8VXY9|UAH_ARATH | 0 | Ureidoglycolate hydrolase (Precursor) |
| trEMBL | tr|G7I3Z0|G7I3Z0_MEDTR | 0 | N-carbamyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:AES61044.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00046 | 100383 | 105014 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K18151 | UAH | EC:3.5.1.116 | Purine metabolism | map00230 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000046s00004796.2 | PF01546.23 | Peptidase_M20 | 130 | 448 | 4.30E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.419 |
| SRR1783600 | control | 40.589 |
| SRR1783602 | moderate drought stress | 30.493 |
| SRR1811619 | moderate drought stress | 30.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.110 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.012 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.913 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.722 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.553 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.284 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 47.251 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 46.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 34.028 |
| SRR2868004 | Drought Stress(Tissue:root) | 26.551 |
| SRR2967015 | Control (Tissue:root) | 25.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 57.244 |
| SRR9715740 | Leave | 64.346 |
| SRR9715741 | Leave | 49.247 |
| SRR9715739 | Root | 8.982 |
| SRR9715742 | Root | 22.821 |
| SRR9715743 | Root | 18.934 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.428 |
| SRR8749028 | MeJA induced 9h | 11.365 |
| SRR8749029 | MeJA induced 9h | 10.417 |
| SRR8749030 | Uninduced | 4.245 |
| SRR8749031 | Uninduced | 2.042 |
| SRR8749032 | Uninduced | 2.778 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 44.071 |
| SRR8400027 | Control-Root | 40.785 |