Gene detail information of Glyur000046s00004822.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61110.1 | 3.00E-92 | NAC domain containing protein 25 |
| NR | XP_007148205.1 | 3.59E-164 | hypothetical protein PHAVU_006G188900g [Phaseolus vulgaris] |
| Swissprot | tr|Q8GY42|NAC25_ARATH | 2.00E-116 | NAC transcription factor 25 |
| trEMBL | tr|V7BQG4|V7BQG4_PHAVU | 1.00E-164 | Uncharacterized protein {ECO:0000313|EMBL:ESW20199.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00046 | 238332 | 239911 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000046s00004822.1 | PF02365.10 | NAM | 18 | 147 | 4.20E-51 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.143 |
| SRR1783600 | control | 1.061 |
| SRR1783602 | moderate drought stress | 1.667 |
| SRR1811619 | moderate drought stress | 1.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.750 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.540 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.128 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.872 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.784 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.389 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.723 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.952 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.583 |
| SRR2967015 | Control (Tissue:root) | 1.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.302 |
| SRR9715740 | Leave | 2.817 |
| SRR9715741 | Leave | 1.977 |
| SRR9715739 | Root | 2.012 |
| SRR9715742 | Root | 1.359 |
| SRR9715743 | Root | 1.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.895 |
| SRR8749028 | MeJA induced 9h | 49.691 |
| SRR8749029 | MeJA induced 9h | 37.449 |
| SRR8749030 | Uninduced | 1.047 |
| SRR8749031 | Uninduced | 0.544 |
| SRR8749032 | Uninduced | 0.546 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.837 |
| SRR8400027 | Control-Root | 4.678 |