Gene detail information of Glyur000046s00004836.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G03390.16.00E-155STRUBBELIG-receptor family 3
NRXP_004485734.10PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X1 [Cicer arietinum]
COGYP_003267608.13.00E-17serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
Swissprottr|Q6R2K3|SRF3_ARATH0Protein STRUBBELIG-RECEPTOR FAMILY 3 (Precursor)
trEMBLtr|G7INX5|G7INX5_MEDTR0Strubbelig receptor family 3 protein {ECO:0000313|EMBL:AES63737.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00046319475325428+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000046s00004836.1PF13516.1LRR_6951111.7
Glyur000046s00004836.1PF13855.1LRR_81171772.00E-06
Glyur000046s00004836.1PF07714.12Pkinase_Tyr4367073.50E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.981
SRR1783600control13.100
SRR1783602moderate drought stress18.080
SRR1811619moderate drought stress17.882

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.358
DRR006520Root Summer glycyrrhizin high producing strain21.396
DRR006521Root Winter glycyrrhizin high producing strain2.253
DRR006522Root Winter glycyrrhizin high producing strain2.070
DRR006523Root Summer glycyrrhizin low producing strain23.697
DRR006524Root Summer glycyrrhizin low producing strain23.561
DRR006525Leaf Summer glycyrrhizin high producing strain4.358
DRR006526Leaf Summer glycyrrhizin high producing strain4.456

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.579
SRR2868004Drought Stress(Tissue:root)8.728
SRR2967015Control (Tissue:root)10.396

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.902
SRR9715740Leave7.846
SRR9715741Leave6.350
SRR9715739Root7.360
SRR9715742Root13.400
SRR9715743Root12.734

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.705
SRR8749028MeJA induced 9h0.990
SRR8749029MeJA induced 9h1.277
SRR8749030Uninduced0.224
SRR8749031Uninduced0.061
SRR8749032Uninduced0.220

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.724
SRR8400027Control-Root18.906

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved