Gene detail

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Gene detail information of Glyur000046s00004862.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G32010.1	4.00E-134	HSI2-like 1
NR	XP_006594624.1	0	PREDICTED: B3 domain-containing protein Os07g0563300-like [Glycine max]
Swissprot	tr\|Q0D5G4\|Y7633_ORYSJ	0	B3 domain-containing protein Os07g0563300
trEMBL	tr\|I1M2C3\|I1M2C3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G31970.1}

Sequence

Transcript Sequence

>Glyur000046s00004862.2
CAACCAACTACTACTGCCACTACTGCCTTTTTTTAAAACCCATTTTCCTCATTTTCTCTGACTTGAAAAACACTCTCACTGCTGTTTCTCTCTCCCTCTCTCCCTAAAATTCTCTCTCTTCTCTCTCTTCTCGCCCTCGCTCTCGCGTATATTATATTATATTATATTATATGATTATATGATTACAGATCAGGCCGCACCAACCATTTGAGGCTTTCACTTCACATCATTCACGGTTGTGGTTGGGGTTTTGAAGTCTCTATGGCCTCTGCTTCTTCTTCCTCTTCCTCCTCCAAGCTCTGCTTCAATTCCGACTGCAAGGAATTGAAGTCCGAAAGACCTAAGAAAGGTTGGAGACTTCGTACCGGAGACCTAGCCGAACTTTGTGATCGATGCGGTTCTGCTTTTGAAGAAGGGAGATTCTGCGAGATTTTTCATGCAAATGCTTCTGGTTGGAGGAATTGTGAGACTTGTAGGAAGGTGATCAATCTTTATGTTAGTTGCTTAAACTGCTTTATTAATGTTACCGTGTTAGATGCAAATAGTTTTACATAGGTTCCCAAAGCCGAGNTATAATTTTTTTATTTTAACTTATGGCTAATCATTCTTTGCAGCGGATTCATTGTGGATGTATTGTTTCAAGTCACACCTTTGTGTTGTTGGATCCAGGAGGAATCGAATGCTTTGCATGTGCCCGCAAAAGTATTACTTTGCCATCTAACCTGCAGTGGCCACAATCGTTTGCTCTTCAAAATCGTCTATCAGAAAGGCTTAGAGACCTATCTGCCAAAGGTTGGAGTCAGTTAGCTGGATCAGGTCCTGTACCATGGAAGCAAGCACCCAGTCTGTTCAATTCAGCTTCTTCATCAGACCTACTTCCAGATGTTCCCTCTCTAGTTGAATTATCAAACGGCTTCGACAAAATTTATGGCAATGAAAGGCTGCCTGCCCCGTCCTTGGAAAAGAAAAATGAGGATTTGTCTGGGATATCAGTTAACTGGAGTGTTAAGTTTGGTTCAAGGGAAATGATGCTTATGAATGGAATGAGGAATGAGGACAAATCAAGTTCATGTTTAAATATGTGCCAACAGCCTCCTTCTCTGAAGGAAGATCCTTCTTCTCAACCATTTGGTTTGTCTNTACCTTATTCATCCCCAAATGAAAGAAATGGTCAAATTGGGGTAACTGGAAGTCATCCACAACAAACTCCACCTCCTCCAGGCAAGCAATTTAGTGGCACTATGCATTTAGCTCTTGACTCATCAGGCGAAGCTCAGGTTCGCAATGGCCGGCCTCGAGCGGATGCCCGAGGAAGAAGTCAGTTGCTACCACGGTACTGGCCCAGATGTACTGATCTGGAGCTACAGCAAATTTCTATTGATGCTAGTGATGCTGGGCGAATTGGGCGTTTGGTGCTACCCAAAAAGTGTGCTGAGACCTACTTCCCACCAATTTCTCAGCCTGAAGGATTGCCACTTAAAATCCTTGATGCAAAAGGAAAGGAATGGATATTTCAGTTTCGCTTCTGGCCAAACAACAACAGCAGAATGTATGTTTTAGAGGGTGTTACTCCATGCATACAGTCCATGCAGTTGCAAGCAGGTGACACAGTAACATTTAGCCGGCTGGAGCCAGAAGGGAGGTTGGTTATGGGATTTAGAAAGGCTTCAAGTGCTATGCCATCCGATCAGGATAGTGAAACTAATAAGACTGGAAATGGATTTTCTGCGCATGGTGAAGTTGAATTGGTTGATCCTAATTCATGGTCAAAAGTTGACAAGTCNGGATACATAGCAAAAGAAGCACTGGGGAGTAAATCTTTAATTTCTAGAAAGAGAAAGAACAGCATNTTGGGTTCAAAAAGTAAACGTCTAAAAATTGAAAATGATGATCTAATAGAGCTGAAGATTACATGGCAAGAAGCTCAAGGCCTGCTCCGCCCCCCTCCTAACCATGTTCCAAGCATTGTGGTGATTGAAGGTTTTGAGTTTGAGGAATATGAGGATGCTCCAGTGCTTGGGAAGCCAACTATTTTCACCAATGATAATATGGGTGAAAAGATCCAGTGGGCTCAATGTGAAGATTGTCTGAAGTGGCGCAAATTGCCAGCTAGTGCGCTTCTTCCATCAAAATGGACGTGCTCAGATAATTCATGGGATCCAGAAAGATCATCTTGTTCAGCTGCGCAAGAGCTGACAGCNGAACAACTTGAGAATTTGTTACCCCCGTGTAATTCAGGGTATGAAAACACTGTTGTGAAATGCATTTATTTGGCAGCTGTTTCCAAGAAAATGAAGGCTGCTAAGCAGGATCCTGATAATGCTGAAGCTTTGGAGGGACTTGACACGCTTGCAAATCTAGCTATCCTGGGAGANGGTGACGCTCTCCCAGCATCTTCTCAGGCCACAACTAAACACCCACGACATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAGCCTCCCAGTGGAAAAGGCCCCAAGCATAAGCAAACATGCACATGTAATGTCTGTCTAACAGTGAAGCGTCGATTCCGTACCCTCATGCTACGGCGTGAGAAGAAACAATCAGAAAGAGAAGCAGAGACAACACGCAAAAAGCAGCAGCAACAGCATCCTCAGCCATTACCTTCATCTGAAATCTTGCTTGATGACGATTCCTTGCATTGTAGTAATACAGGNGATAGTAGCCCAAACCAGAACAAGGAGGGTAATGATGGTTCTGATGATGATCCTCACCGGATGAAATCATCTGTTTCNCCGTTCAAAGGCCAAATTGACCTCAATATCCAGCCAGAGCGAGAAGATGAATTTTCACCCGGTTCAGATTCTGGTGGTGCGATTAAGCTGCTCCATGATGCTACTGAGAGGTACCTCAAGCAGCAGACTGTGTTGAACTCTGGTAATGGAGATCCATCAGGCAGTCAGTCACAGCAGGCAGGTGATGGAGTGAGGGAAGAGAAACTTAGCAATGGTGTTGCCCATGGCAGTAGTAGTCATAATGCTGATAAGGAGCATGCCCAATCTTTGTCTATGAATGTGTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00046	473640	483457	-

Gene family

Gene family	subfamily
Transcription Factors Family	B3
EAR motif-containing Proteins	B3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0003677 DNA binding

GO:0008270 zinc ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000046s00004862.2	PF02362.16	B3	265	357	1.20E-13
Glyur000046s00004862.2	PF07496.10	zf-CW	491	534	1.90E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	42.126
SRR1783600	control	42.611
SRR1783602	moderate drought stress	49.558
SRR1811619	moderate drought stress	49.230

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	39.940
DRR006520	Root Summer glycyrrhizin high producing strain	39.442
DRR006521	Root Winter glycyrrhizin high producing strain	45.641
DRR006522	Root Winter glycyrrhizin high producing strain	44.249
DRR006523	Root Summer glycyrrhizin low producing strain	48.263
DRR006524	Root Summer glycyrrhizin low producing strain	48.495
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.871
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.819

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	43.692
SRR2868004	Drought Stress(Tissue:root)	50.681
SRR2967015	Control (Tissue:root)	58.187

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	66.554
SRR9715740	Leave	44.882
SRR9715741	Leave	72.034
SRR9715739	Root	18.727
SRR9715742	Root	86.551
SRR9715743	Root	76.348

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	59.095
SRR8749028	MeJA induced 9h	62.518
SRR8749029	MeJA induced 9h	43.010
SRR8749030	Uninduced	48.804
SRR8749031	Uninduced	21.989
SRR8749032	Uninduced	23.592

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	49.776
SRR8400027	Control-Root	51.830