Gene detail information of Glyur000046s00004863.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G21540.10sphingosine kinase 1
NRXP_004485708.10PREDICTED: sphingosine kinase A-like [Cicer arietinum]
COGYP_001516029.16.00E-65sphingosine kinase 2 [Acaryochloris marina MBIC11017]
Swissprottr|Q8L7L1|SPHK1_ARATH0Sphingosine kinase 1
trEMBLtr|A0A072V3V9|A0A072V3V9_MEDTR0D-erythro-sphingosine kinase/diacylglycerol kinase {ECO:0000313|EMBL:KEH36517.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00046495140500483-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04718SPHK EC:2.7.1.91 Sphingolipid metabolism map00600
VEGF signaling pathwaymap04370
Calcium signaling pathwaymap04020
Sphingolipid signaling pathwaymap04071
Fc gamma R-mediated phagocytosismap04666
Tuberculosismap05152


Gene Ontology

molecular_function

GO:0016301  kinase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000046s00004863.1PF00781.19DAGK_cat1132426.90E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.350
SRR1783600control6.409
SRR1783602moderate drought stress8.720
SRR1811619moderate drought stress8.691

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.253
DRR006520Root Summer glycyrrhizin high producing strain10.065
DRR006521Root Winter glycyrrhizin high producing strain16.669
DRR006522Root Winter glycyrrhizin high producing strain16.073
DRR006523Root Summer glycyrrhizin low producing strain14.826
DRR006524Root Summer glycyrrhizin low producing strain15.193
DRR006525Leaf Summer glycyrrhizin high producing strain5.452
DRR006526Leaf Summer glycyrrhizin high producing strain5.413

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.668
SRR2868004Drought Stress(Tissue:root)26.217
SRR2967015Control (Tissue:root)25.311

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.238
SRR9715740Leave15.268
SRR9715741Leave19.037
SRR9715739Root8.904
SRR9715742Root8.862
SRR9715743Root10.481

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.605
SRR8749028MeJA induced 9h28.634
SRR8749029MeJA induced 9h21.603
SRR8749030Uninduced44.219
SRR8749031Uninduced26.314
SRR8749032Uninduced34.777

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.860
SRR8400027Control-Root18.200

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved