Gene detail information of Glyur000047s00003969.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G60900.11.00E-61receptor-like protein kinase 1
NRXP_004511723.10PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Cicer arietinum]
COGYP_002464516.11.00E-12PASTA sensor-containing serine/threonine protein kinase [Chloroflexus aggregans DSM 9485]
Swissprottr|Q39202|RLK1_ARATH3.00E-71G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 (Precursor)
trEMBLtr|G7JXG0|G7JXG0_MEDTR0Malectin/receptor-like kinase family protein {ECO:0000313|EMBL:AES94317.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00047122670125217+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000047s00003969.1PF01453.19B_lectin741236.80E-10
Glyur000047s00003969.1PF00069.20Pkinase4685782.00E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.059
SRR1783600control0.074
SRR1783602moderate drought stress0.376
SRR1811619moderate drought stress0.318

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.188
DRR006520Root Summer glycyrrhizin high producing strain1.057
DRR006521Root Winter glycyrrhizin high producing strain1.550
DRR006522Root Winter glycyrrhizin high producing strain1.421
DRR006523Root Summer glycyrrhizin low producing strain0.660
DRR006524Root Summer glycyrrhizin low producing strain0.611
DRR006525Leaf Summer glycyrrhizin high producing strain0.047
DRR006526Leaf Summer glycyrrhizin high producing strain0.046

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.468
SRR2868004Drought Stress(Tissue:root)1.013
SRR2967015Control (Tissue:root)1.159

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.652
SRR9715740Leave8.095
SRR9715741Leave1.913
SRR9715739Root1.344
SRR9715742Root1.233
SRR9715743Root1.180

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.156
SRR8749028MeJA induced 9h3.662
SRR8749029MeJA induced 9h1.610
SRR8749030Uninduced4.365
SRR8749031Uninduced1.401
SRR8749032Uninduced1.491

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.712
SRR8400027Control-Root2.204

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved