Gene detail information of Glyur000047s00003991.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G07440.24.00E-163glutamate dehydrogenase 2
NRXP_003517396.10PREDICTED: glutamate dehydrogenase 2-like [Glycine max]
COGYP_004270382.15.00E-120glutamate dehydrogenase [Planctomyces brasiliensis DSM 5305]
Swissprottr|Q38946|DHE2_ARATH0Glutamate dehydrogenase 2
trEMBLtr|I1J9Q7|I1J9Q7_SOYBN0Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00047243740247296-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00261GLUD1_2, gdhA EC:1.4.1.3 Carbon metabolism map01200
Nitrogen metabolismmap00910
Alanine, aspartate and glutamate metabolismmap00250
Arginine biosynthesismap00220
D-Glutamine and D-glutamate metabolismmap00471
Proximal tubule bicarbonate reclamationmap04964


Gene Ontology

biological_process

GO:0006520  cellular amino acid metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000047s00003991.1PF02812.13ELFV_dehydrog_N331601.50E-46
Glyur000047s00003991.1PF00208.16ELFV_dehydrog1742847.50E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.292
SRR1783600control1.242
SRR1783602moderate drought stress1.162
SRR1811619moderate drought stress1.190

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.852
DRR006520Root Summer glycyrrhizin high producing strain5.092
DRR006521Root Winter glycyrrhizin high producing strain5.976
DRR006522Root Winter glycyrrhizin high producing strain5.901
DRR006523Root Summer glycyrrhizin low producing strain2.175
DRR006524Root Summer glycyrrhizin low producing strain2.260
DRR006525Leaf Summer glycyrrhizin high producing strain0.683
DRR006526Leaf Summer glycyrrhizin high producing strain0.711

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.993
SRR2868004Drought Stress(Tissue:root)10.794
SRR2967015Control (Tissue:root)10.179

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.884
SRR9715740Leave6.229
SRR9715741Leave10.520
SRR9715739Root2.647
SRR9715742Root7.775
SRR9715743Root5.320

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.269
SRR8749028MeJA induced 9h27.342
SRR8749029MeJA induced 9h19.759
SRR8749030Uninduced82.171
SRR8749031Uninduced62.682
SRR8749032Uninduced75.925

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.252
SRR8400027Control-Root8.609

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved