Gene detail information of Glyur000047s00003997.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33950.12.00E-138Protein kinase superfamily protein
NRXP_006572904.10PREDICTED: protein kinase isoform X1 [Glycine max]
COGYP_004862245.13.00E-28protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
Swissprottr|P0C5D6|SAPK3_ORYSJ0Serine/threonine-protein kinase SAPK3
trEMBLtr|I1J9Q1|I1J9Q1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G41260.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00047265410268267-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14498SNRK2 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000047s00003997.1PF00069.20Pkinase52861.10E-65


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.712
SRR1783600control6.750
SRR1783602moderate drought stress4.703
SRR1811619moderate drought stress4.772

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.734
DRR006520Root Summer glycyrrhizin high producing strain7.846
DRR006521Root Winter glycyrrhizin high producing strain35.146
DRR006522Root Winter glycyrrhizin high producing strain34.146
DRR006523Root Summer glycyrrhizin low producing strain10.712
DRR006524Root Summer glycyrrhizin low producing strain11.414
DRR006525Leaf Summer glycyrrhizin high producing strain8.941
DRR006526Leaf Summer glycyrrhizin high producing strain8.568

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.805
SRR2868004Drought Stress(Tissue:root)2.378
SRR2967015Control (Tissue:root)3.160

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.982
SRR9715740Leave2.807
SRR9715741Leave4.610
SRR9715739Root1.741
SRR9715742Root10.727
SRR9715743Root9.455

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.512
SRR8749028MeJA induced 9h2.118
SRR8749029MeJA induced 9h5.421
SRR8749030Uninduced0.737
SRR8749031Uninduced0.066
SRR8749032Uninduced0.419

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.688
SRR8400027Control-Root11.663

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved