Gene detail information of Glyur000047s00004004.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G47070.14.00E-127Protein kinase superfamily protein
NRXP_003611406.10NAK-type protein kinase [Medicago truncatula]
COGYP_005517714.17.00E-23serine/threonine protein kinase with PASTA sensor(s) [Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1]
Swissprottr|Q9LTC0|Y5707_ARATH3.00E-158Probable receptor-like protein kinase At5g47070
trEMBLtr|G7JYN0|G7JYN0_MEDTR0Receptor-like kinase plant {ECO:0000313|EMBL:AES94364.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00047299049302087+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000047s00004004.1PF00069.20Pkinase743493.90E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.814
SRR1783600control1.880
SRR1783602moderate drought stress0.718
SRR1811619moderate drought stress0.861

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.089
DRR006520Root Summer glycyrrhizin high producing strain21.793
DRR006521Root Winter glycyrrhizin high producing strain3.130
DRR006522Root Winter glycyrrhizin high producing strain2.960
DRR006523Root Summer glycyrrhizin low producing strain51.541
DRR006524Root Summer glycyrrhizin low producing strain49.773
DRR006525Leaf Summer glycyrrhizin high producing strain42.123
DRR006526Leaf Summer glycyrrhizin high producing strain42.625

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.630
SRR2868004Drought Stress(Tissue:root)6.092
SRR2967015Control (Tissue:root)8.802

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave86.378
SRR9715740Leave109.997
SRR9715741Leave84.079
SRR9715739Root6.253
SRR9715742Root21.921
SRR9715743Root16.619

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h94.182
SRR8749028MeJA induced 9h70.156
SRR8749029MeJA induced 9h56.233
SRR8749030Uninduced25.405
SRR8749031Uninduced8.000
SRR8749032Uninduced10.224

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.892
SRR8400027Control-Root7.285

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved