Gene detail information of Glyur000047s00004006.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G32730.1 | 2.00E-78 | |
| NR | XP_006600880.1 | 2.26E-166 | PREDICTED: uncharacterized protein LOC100816049 isoform X1 [Glycine max] |
| trEMBL | tr|V7CEE7|V7CEE7_PHAVU | 1.00E-166 | Uncharacterized protein {ECO:0000313|EMBL:ESW27728.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00047 | 312704 | 317109 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SRS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000047s00004006.1 | PF05142.7 | DUF702 | 27 | 103 | 4.10E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.402 |
| SRR1783600 | control | 15.446 |
| SRR1783602 | moderate drought stress | 22.287 |
| SRR1811619 | moderate drought stress | 22.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.201 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.185 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 42.758 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 41.602 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.359 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.338 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.812 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 14.870 |
| SRR2868004 | Drought Stress(Tissue:root) | 14.173 |
| SRR2967015 | Control (Tissue:root) | 14.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.390 |
| SRR9715740 | Leave | 9.196 |
| SRR9715741 | Leave | 7.188 |
| SRR9715739 | Root | 1.199 |
| SRR9715742 | Root | 4.166 |
| SRR9715743 | Root | 3.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.012 |
| SRR8749028 | MeJA induced 9h | 16.279 |
| SRR8749029 | MeJA induced 9h | 22.830 |
| SRR8749030 | Uninduced | 10.855 |
| SRR8749031 | Uninduced | 6.034 |
| SRR8749032 | Uninduced | 6.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 15.058 |
| SRR8400027 | Control-Root | 13.057 |