Gene detail information of Glyur000048s00002217.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00048 | 133216 | 137893 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01873 | VARS, valS | EC:6.1.1.9 | Aminoacyl-tRNA biosynthesis | map00970 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.109 |
| SRR1783600 | control | 2.956 |
| SRR1783602 | moderate drought stress | 6.059 |
| SRR1811619 | moderate drought stress | 6.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.889 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.660 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.114 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.462 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.748 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.804 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.581 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.429 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.225 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.367 |
| SRR2967015 | Control (Tissue:root) | 1.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 9.126 |
| SRR9715740 | Leave | 5.003 |
| SRR9715741 | Leave | 9.042 |
| SRR9715739 | Root | 0.270 |
| SRR9715742 | Root | 1.529 |
| SRR9715743 | Root | 1.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.656 |
| SRR8749028 | MeJA induced 9h | 0.574 |
| SRR8749029 | MeJA induced 9h | 0.664 |
| SRR8749030 | Uninduced | 0.574 |
| SRR8749031 | Uninduced | 0.524 |
| SRR8749032 | Uninduced | 0.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.091 |
| SRR8400027 | Control-Root | 0.947 |