Gene detail information of Glyur000048s00002242.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G64810.11.00E-23WRKY DNA-binding protein 51
NRXP_003630118.11.46E-72WRKY transcription factor [Medicago truncatula]
Swissprottr|Q93WU9|WRK51_ARATH6.00E-29Probable WRKY transcription factor 51
trEMBLtr|G7LBB4|G7LBB4_MEDTR5.00E-73WRKY family transcription factor {ECO:0000313|EMBL:AET04594.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00048251948254453-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000048s00002242.1PF03106.10WRKY1161562.80E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.596
SRR1783600control3.748
SRR1783602moderate drought stress5.190
SRR1811619moderate drought stress5.139

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.692
DRR006520Root Summer glycyrrhizin high producing strain15.652
DRR006521Root Winter glycyrrhizin high producing strain0.429
DRR006522Root Winter glycyrrhizin high producing strain0.419
DRR006523Root Summer glycyrrhizin low producing strain139.458
DRR006524Root Summer glycyrrhizin low producing strain140.317
DRR006525Leaf Summer glycyrrhizin high producing strain24.239
DRR006526Leaf Summer glycyrrhizin high producing strain23.624

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.626
SRR2868004Drought Stress(Tissue:root)16.741
SRR2967015Control (Tissue:root)11.577

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave32.285
SRR9715740Leave29.206
SRR9715741Leave69.484
SRR9715739Root2.409
SRR9715742Root9.814
SRR9715743Root6.741

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.207
SRR8749028MeJA induced 9h35.958
SRR8749029MeJA induced 9h40.215
SRR8749030Uninduced52.406
SRR8749031Uninduced59.179
SRR8749032Uninduced27.066

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.665
SRR8400027Control-Root5.536

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved