Gene detail information of Glyur000048s00002271.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13330.12.00E-26related to AP2 6l
NRKHN34033.17.73E-89Ethylene-responsive transcription factor ERF114 [Glycine soja]
Swissprottr|Q9FGF8|ABR1_ARATH4.00E-33Ethylene-responsive transcription factor ABR1
trEMBLtr|G7LC78|G7LC78_MEDTR1.00E-83DNA-binding domain protein {ECO:0000313|EMBL:AET04637.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00048437612442691-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000048s00002271.1PF00847.15AP22833321.40E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.061
SRR1783600control0.066
SRR1783602moderate drought stress0.058
SRR1811619moderate drought stress0.057

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.173
DRR006520Root Summer glycyrrhizin high producing strain0.071
DRR006521Root Winter glycyrrhizin high producing strain53.340
DRR006522Root Winter glycyrrhizin high producing strain52.503
DRR006523Root Summer glycyrrhizin low producing strain0.156
DRR006524Root Summer glycyrrhizin low producing strain0.258
DRR006525Leaf Summer glycyrrhizin high producing strain0.189
DRR006526Leaf Summer glycyrrhizin high producing strain0.202

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.504
SRR2868004Drought Stress(Tissue:root)0.796
SRR2967015Control (Tissue:root)1.110

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.944
SRR9715740Leave6.502
SRR9715741Leave26.235
SRR9715739Root0.000
SRR9715742Root0.709
SRR9715743Root0.365

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.040
SRR8749028MeJA induced 9h0.182
SRR8749029MeJA induced 9h2.259
SRR8749030Uninduced4.744
SRR8749031Uninduced18.702
SRR8749032Uninduced30.115

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.079
SRR8400027Control-Root0.185

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved