Gene detail information of Glyur000048s00002283.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G39330.12.00E-139cinnamyl alcohol dehydrogenase 9
NRO82515.10RecName: Full=Probable mannitol dehydrogenase; AltName: Full=NAD-dependent mannitol dehydrogenase [Medicago sativa]
COGNP_386798.17.00E-123zinc-type alcohol dehydrogenase [Sinorhizobium meliloti 1021]
Swissprottr|O82515|MTDH_MEDSA0Probable mannitol dehydrogenase
trEMBLtr|Q53X16|Q53X16_MEDSA0Cinnamyl-alcohol dehydrogenase {ECO:0000313|EMBL:AAL34328.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00048491905495408-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00083E1.1.1.195 EC:1.1.1.195 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000048s00002283.1PF08240.7ADH_N381508.40E-29
Glyur000048s00002283.1PF00107.21ADH_zinc_N1933152.00E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.451
SRR1783600control9.532
SRR1783602moderate drought stress13.067
SRR1811619moderate drought stress13.102

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.849
DRR006520Root Summer glycyrrhizin high producing strain9.853
DRR006521Root Winter glycyrrhizin high producing strain3.548
DRR006522Root Winter glycyrrhizin high producing strain3.551
DRR006523Root Summer glycyrrhizin low producing strain7.795
DRR006524Root Summer glycyrrhizin low producing strain7.787
DRR006525Leaf Summer glycyrrhizin high producing strain24.978
DRR006526Leaf Summer glycyrrhizin high producing strain24.959

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.852
SRR2868004Drought Stress(Tissue:root)2.677
SRR2967015Control (Tissue:root)4.447

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.875
SRR9715740Leave21.312
SRR9715741Leave22.254
SRR9715739Root3.148
SRR9715742Root10.348
SRR9715743Root9.876

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.652
SRR8749028MeJA induced 9h4.774
SRR8749029MeJA induced 9h3.239
SRR8749030Uninduced3.997
SRR8749031Uninduced0.488
SRR8749032Uninduced2.792

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.606
SRR8400027Control-Root17.207

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved