Gene detail information of Glyur000049s00003111.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G01850.20S-adenosylmethionine synthetase 2
NRXP_003554569.10PREDICTED: S-adenosylmethionine synthase 1-like isoform 1 [Glycine max]
COGYP_008801702.16.00E-153S-adenosylmethionine synthetase [Exiguobacterium sp. MH3]
Swissprottr|A9P822|METK1_POPTR0S-adenosylmethionine synthase 1
trEMBLtr|I1NBG9|I1NBG9_SOYBN0S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000496834870816-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00789metK EC:2.5.1.6 Biosynthesis of amino acids map01230
Cysteine and methionine metabolismmap00270


Gene Ontology

biological_process

GO:0006556  S-adenosylmethionine biosynthetic process


molecular_function

GO:0004478  methionine adenosyltransferase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000049s00003111.1PF00438.15S-AdoMet_synt_N421301.20E-35
Glyur000049s00003111.1PF02772.11S-AdoMet_synt_M1452671.10E-49
Glyur000049s00003111.1PF02773.11S-AdoMet_synt_C2694095.40E-67


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control195.546
SRR1783600control194.987
SRR1783602moderate drought stress195.136
SRR1811619moderate drought stress193.664

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain281.512
DRR006520Root Summer glycyrrhizin high producing strain280.015
DRR006521Root Winter glycyrrhizin high producing strain256.759
DRR006522Root Winter glycyrrhizin high producing strain271.027
DRR006523Root Summer glycyrrhizin low producing strain203.995
DRR006524Root Summer glycyrrhizin low producing strain205.105
DRR006525Leaf Summer glycyrrhizin high producing strain112.134
DRR006526Leaf Summer glycyrrhizin high producing strain112.232

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)726.373
SRR2868004Drought Stress(Tissue:root)676.544
SRR2967015Control (Tissue:root)578.979

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave332.094
SRR9715740Leave296.333
SRR9715741Leave366.671
SRR9715739Root592.956
SRR9715742Root501.447
SRR9715743Root490.501

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h352.297
SRR8749028MeJA induced 9h473.449
SRR8749029MeJA induced 9h156.690
SRR8749030Uninduced579.108
SRR8749031Uninduced133.933
SRR8749032Uninduced181.222

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root518.747
SRR8400027Control-Root476.420

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved