Gene detail information of Glyur000049s00003122.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G26751.10shaggy-related kinase 11
NRCAA48472.10protein kinase [Medicago sativa]
COGYP_008149401.11.00E-24hypothetical protein SCE1572_14835 [Sorangium cellulosum So0157-2]
Swissprottr|P51139|MSK3_MEDSA0Glycogen synthase kinase-3 homolog MsK-3
trEMBLtr|G7KTQ8|G7KTQ8_MEDTR0Uncharacterized protein {ECO:0000313|EMBL:AFK38277.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00049122368125996+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000049s00003122.1PF00069.20Pkinase763571.90E-62


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control75.798
SRR1783600control76.306
SRR1783602moderate drought stress69.784
SRR1811619moderate drought stress69.013

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain52.315
DRR006520Root Summer glycyrrhizin high producing strain51.931
DRR006521Root Winter glycyrrhizin high producing strain53.125
DRR006522Root Winter glycyrrhizin high producing strain51.278
DRR006523Root Summer glycyrrhizin low producing strain109.035
DRR006524Root Summer glycyrrhizin low producing strain108.436
DRR006525Leaf Summer glycyrrhizin high producing strain53.319
DRR006526Leaf Summer glycyrrhizin high producing strain53.411

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)118.834
SRR2868004Drought Stress(Tissue:root)125.584
SRR2967015Control (Tissue:root)120.489

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave87.659
SRR9715740Leave71.329
SRR9715741Leave108.492
SRR9715739Root82.890
SRR9715742Root115.562
SRR9715743Root109.091

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h152.839
SRR8749028MeJA induced 9h113.209
SRR8749029MeJA induced 9h139.924
SRR8749030Uninduced145.402
SRR8749031Uninduced115.085
SRR8749032Uninduced101.256

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root108.724
SRR8400027Control-Root140.153

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved