Gene detail information of Glyur000049s00003133.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G47180.15.00E-152galactinol synthase 1
NRXP_003626005.10Galactinol synthase [Medicago truncatula]
COGYP_004116387.14.00E-32glycosyl transferase family protein [Pantoea sp. At-9b]
Swissprottr|O22893|GOLS1_ARATH0Galactinol synthase 1
trEMBLtr|G7KTP3|G7KTP3_MEDTR0Galactinol synthase {ECO:0000313|EMBL:AES82223.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00049175091177821-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18819GOLS EC:2.4.1.123 Galactose metabolism map00052


Gene Ontology

biological_process

GO:0006012  galactose metabolic process


molecular_function

GO:0016757  transferase activity, transferring glycosyl groups

GO:0047216  inositol 3-alpha-galactosyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000049s00003133.1PF01501.15Glyco_transf_8282716.00E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.984
SRR1783600control9.876
SRR1783602moderate drought stress17.317
SRR1811619moderate drought stress17.020

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.962
DRR006520Root Summer glycyrrhizin high producing strain9.945
DRR006521Root Winter glycyrrhizin high producing strain5.866
DRR006522Root Winter glycyrrhizin high producing strain5.621
DRR006523Root Summer glycyrrhizin low producing strain5.062
DRR006524Root Summer glycyrrhizin low producing strain5.047
DRR006525Leaf Summer glycyrrhizin high producing strain18.711
DRR006526Leaf Summer glycyrrhizin high producing strain18.640

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.672
SRR2868004Drought Stress(Tissue:root)11.964
SRR2967015Control (Tissue:root)9.113

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.763
SRR9715740Leave7.268
SRR9715741Leave4.996
SRR9715739Root3.463
SRR9715742Root11.060
SRR9715743Root12.387

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.344
SRR8749028MeJA induced 9h6.656
SRR8749029MeJA induced 9h5.130
SRR8749030Uninduced0.577
SRR8749031Uninduced0.399
SRR8749032Uninduced0.436

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.114
SRR8400027Control-Root15.571

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved