Gene detail information of Glyur000049s00003147.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G47260.14.00E-44WRKY DNA-binding protein 23
NRAFK46128.13.90E-102unknown [Medicago truncatula]
Swissprottr|O22900|WRK23_ARATH8.00E-54Probable WRKY transcription factor 23
trEMBLtr|I3T0T6|I3T0T6_MEDTR1.00E-102Uncharacterized protein {ECO:0000313|EMBL:AFK46128.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00049251160252801-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000049s00003147.1PF03106.10WRKY1321824.30E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.430
SRR1783600control17.733
SRR1783602moderate drought stress23.080
SRR1811619moderate drought stress22.431

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain38.110
DRR006520Root Summer glycyrrhizin high producing strain37.878
DRR006521Root Winter glycyrrhizin high producing strain26.407
DRR006522Root Winter glycyrrhizin high producing strain25.729
DRR006523Root Summer glycyrrhizin low producing strain74.158
DRR006524Root Summer glycyrrhizin low producing strain74.959
DRR006525Leaf Summer glycyrrhizin high producing strain6.875
DRR006526Leaf Summer glycyrrhizin high producing strain7.170

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.935
SRR2868004Drought Stress(Tissue:root)18.784
SRR2967015Control (Tissue:root)24.330

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.110
SRR9715740Leave16.206
SRR9715741Leave17.566
SRR9715739Root25.880
SRR9715742Root39.370
SRR9715743Root32.262

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.590
SRR8749028MeJA induced 9h22.938
SRR8749029MeJA induced 9h21.130
SRR8749030Uninduced23.621
SRR8749031Uninduced3.997
SRR8749032Uninduced6.847

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.075
SRR8400027Control-Root22.831

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved