Gene detail information of Glyur000049s00003159.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G66350.1 | 1.00E-44 | RGA-like 1 |
| NR | XP_006605250.1 | 0 | PREDICTED: DELLA protein GAI1-like [Glycine max] |
| Swissprot | tr|Q9C8Y3|RGL1_ARATH | 6.00E-54 | DELLA protein RGL1 |
| trEMBL | tr|K7MZL1|K7MZL1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G40440.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00049 | 345979 | 347718 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRAS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000049s00003159.1 | PF03514.9 | GRAS | 208 | 577 | 4.60E-83 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.482 |
| SRR1783600 | control | 0.478 |
| SRR1783602 | moderate drought stress | 0.066 |
| SRR1811619 | moderate drought stress | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.125 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.124 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.179 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.132 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.063 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.064 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.655 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.469 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.535 |
| SRR2967015 | Control (Tissue:root) | 3.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.153 |
| SRR9715740 | Leave | 0.107 |
| SRR9715741 | Leave | 0.225 |
| SRR9715739 | Root | 0.005 |
| SRR9715742 | Root | 0.514 |
| SRR9715743 | Root | 0.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.320 |
| SRR8749028 | MeJA induced 9h | 2.099 |
| SRR8749029 | MeJA induced 9h | 2.084 |
| SRR8749030 | Uninduced | 4.585 |
| SRR8749031 | Uninduced | 15.394 |
| SRR8749032 | Uninduced | 18.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.827 |
| SRR8400027 | Control-Root | 2.768 |