Gene detail information of Glyur000049s00003160.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02020.1 | 2.00E-68 | SET domain-containing protein |
| NR | XP_004515047.1 | 0 | PREDICTED: histone-lysine N-methyltransferase EZA1-like [Cicer arietinum] |
| Swissprot | tr|Q9ZSM8|EZA1_ARATH | 8.00E-74 | Histone-lysine N-methyltransferase EZA1 |
| trEMBL | tr|G7L054|G7L054_MEDTR | 6.00E-165 | Histone-lysine N-methyltransferase {ECO:0000313|EMBL:AES79083.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00049 | 357794 | 365034 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SET |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K11430 | EZH2 | EC:2.1.1.43 | Lysine degradation | map00310 |
| MicroRNAs in cancer | map05206 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000049s00003160.2 | PF00856.23 | SET | 609 | 665 | 3.50E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.079 |
| SRR1783600 | control | 2.119 |
| SRR1783602 | moderate drought stress | 3.209 |
| SRR1811619 | moderate drought stress | 3.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.554 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.155 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.932 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.768 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.144 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.507 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.750 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.807 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.081 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.278 |
| SRR2967015 | Control (Tissue:root) | 15.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.643 |
| SRR9715740 | Leave | 2.206 |
| SRR9715741 | Leave | 4.289 |
| SRR9715739 | Root | 0.406 |
| SRR9715742 | Root | 1.361 |
| SRR9715743 | Root | 1.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.470 |
| SRR8749028 | MeJA induced 9h | 11.143 |
| SRR8749029 | MeJA induced 9h | 11.657 |
| SRR8749030 | Uninduced | 9.082 |
| SRR8749031 | Uninduced | 12.026 |
| SRR8749032 | Uninduced | 8.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.882 |
| SRR8400027 | Control-Root | 10.767 |