Gene detail information of Glyur000049s00003167.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G02060.20Minichromosome maintenance (MCM2/3/5) family protein
NRXP_004494419.10PREDICTED: protein PROLIFERA-like isoform X1 [Cicer arietinum]
COGYP_006362644.11.00E-119MCM family protein [Thermogladius cellulolyticus 1633]
Swissprottr|B8BMI1|MCM7_ORYSI0DNA replication licensing factor MCM7
trEMBLtr|G7KST3|G7KST3_MEDTR0DNA replication licensing factor Mcm7, putative {ECO:0000313|EMBL:AES82184.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00049401873406918+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02210MCM7, CDC47 EC:3.6.4.12 DNA replication map03030
Cell cyclemap04110
Cell cycle - yeastmap04111
Meiosis - yeastmap04113


Gene Ontology

biological_process

GO:0006260  DNA replication

GO:0006270  DNA replication initiation


cellular_component

GO:0005634  nucleus

GO:0042555  MCM complex


molecular_function

GO:0003677  DNA binding

GO:0003678  DNA helicase activity

GO:0005524  ATP binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000049s00003167.1PF14551.1MCM_N161616.10E-24
Glyur000049s00003167.1PF00493.18MCM3166383.80E-131


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.920
SRR1783600control6.902
SRR1783602moderate drought stress2.585
SRR1811619moderate drought stress2.509

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.683
DRR006520Root Summer glycyrrhizin high producing strain5.653
DRR006521Root Winter glycyrrhizin high producing strain0.357
DRR006522Root Winter glycyrrhizin high producing strain0.356
DRR006523Root Summer glycyrrhizin low producing strain2.999
DRR006524Root Summer glycyrrhizin low producing strain3.038
DRR006525Leaf Summer glycyrrhizin high producing strain0.965
DRR006526Leaf Summer glycyrrhizin high producing strain0.949

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.014
SRR2868004Drought Stress(Tissue:root)9.891
SRR2967015Control (Tissue:root)10.343

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.247
SRR9715740Leave0.278
SRR9715741Leave1.266
SRR9715739Root2.143
SRR9715742Root2.702
SRR9715743Root2.226

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h33.306
SRR8749028MeJA induced 9h21.579
SRR8749029MeJA induced 9h17.717
SRR8749030Uninduced1.176
SRR8749031Uninduced0.671
SRR8749032Uninduced1.011

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.334
SRR8400027Control-Root12.118

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved