Gene detail information of Glyur000050s00005676.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G18580.10galacturonosyltransferase 11
NRXP_004508654.10PREDICTED: probable galacturonosyltransferase 11-like isoform X1 [Cicer arietinum]
COGYP_007080337.12.00E-06LPS:glycosyltransferase [Pleurocapsa sp. PCC 7327]
Swissprottr|Q949Q1|GAUTB_ARATH0Probable galacturonosyltransferase 11
trEMBLtr|A0A072V1Q3|A0A072V1Q3_MEDTR0CAZy family GT8 glycosyltransferase {ECO:0000313|EMBL:KEH32050.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000502053823823-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13648GAUT EC:2.4.1.43 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

molecular_function

GO:0016757  transferase activity, transferring glycosyl groups

GO:0047262  polygalacturonate 4-alpha-galacturonosyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000050s00005676.1PF01501.15Glyco_transf_82575273.90E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.029
SRR1783600control10.163
SRR1783602moderate drought stress8.051
SRR1811619moderate drought stress8.229

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.836
DRR006520Root Summer glycyrrhizin high producing strain21.479
DRR006521Root Winter glycyrrhizin high producing strain11.870
DRR006522Root Winter glycyrrhizin high producing strain11.680
DRR006523Root Summer glycyrrhizin low producing strain18.204
DRR006524Root Summer glycyrrhizin low producing strain18.166
DRR006525Leaf Summer glycyrrhizin high producing strain6.343
DRR006526Leaf Summer glycyrrhizin high producing strain6.309

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.120
SRR2868004Drought Stress(Tissue:root)11.240
SRR2967015Control (Tissue:root)9.933

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.562
SRR9715740Leave9.910
SRR9715741Leave8.538
SRR9715739Root5.930
SRR9715742Root12.843
SRR9715743Root12.644

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.389
SRR8749028MeJA induced 9h2.903
SRR8749029MeJA induced 9h3.147
SRR8749030Uninduced2.348
SRR8749031Uninduced1.493
SRR8749032Uninduced2.053

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.428
SRR8400027Control-Root9.032

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved