Gene detail information of Glyur000050s00005694.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G60970.1 | 7.00E-41 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 |
| NR | XP_004508663.1 | 2.73E-78 | PREDICTED: transcription factor TCP5-like [Cicer arietinum] |
| Swissprot | tr|Q9FME3|TCP5_ARATH | 5.00E-47 | Transcription factor TCP5 |
| trEMBL | tr|K7MKI8|K7MKI8_SOYBN | 2.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G08761.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00050 | 141002 | 142592 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | TCP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000050s00005694.1 | PF03634.8 | TCP | 74 | 204 | 3.60E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.648 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.001 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.295 |
| SRR9715740 | Leave | 4.546 |
| SRR9715741 | Leave | 6.062 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.024 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.224 |
| SRR8749028 | MeJA induced 9h | 0.770 |
| SRR8749029 | MeJA induced 9h | 1.475 |
| SRR8749030 | Uninduced | 0.947 |
| SRR8749031 | Uninduced | 0.855 |
| SRR8749032 | Uninduced | 0.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.001 |