Gene detail information of Glyur000050s00005699.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G74210.16.00E-173PLC-like phosphodiesterases superfamily protein
NRXP_004508666.10PREDICTED: glycerophosphoryl diester phosphodiesterase-like [Cicer arietinum]
COGYP_617251.11.00E-65glycerophosphoryl diester phosphodiesterase [Sphingopyxis alaskensis RB2256]
Swissprottr|Q9C907|GDPD5_ARATH0Glycerophosphodiester phosphodiesterase GDPD5 {ECO:0000305} (Precursor)
trEMBLtr|G0T431|G0T431_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G00360.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00050169201173828+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01126E3.1.4.46, glpQ, ugpQ EC:3.1.4.46 Glycerophospholipid metabolism map00564


Gene Ontology

biological_process

GO:0006071  glycerol metabolic process

GO:0006629  lipid metabolic process


molecular_function

GO:0008081  phosphoric diester hydrolase activity

GO:0008889  glycerophosphodiester phosphodiesterase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000050s00005699.1PF03009.12GDPD493561.20E-65


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.359
SRR1783600control19.185
SRR1783602moderate drought stress11.785
SRR1811619moderate drought stress12.097

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.101
DRR006520Root Summer glycyrrhizin high producing strain29.508
DRR006521Root Winter glycyrrhizin high producing strain8.907
DRR006522Root Winter glycyrrhizin high producing strain8.459
DRR006523Root Summer glycyrrhizin low producing strain32.760
DRR006524Root Summer glycyrrhizin low producing strain33.168
DRR006525Leaf Summer glycyrrhizin high producing strain19.699
DRR006526Leaf Summer glycyrrhizin high producing strain19.419

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)37.844
SRR2868004Drought Stress(Tissue:root)26.396
SRR2967015Control (Tissue:root)25.260

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave44.082
SRR9715740Leave39.403
SRR9715741Leave51.277
SRR9715739Root4.456
SRR9715742Root15.705
SRR9715743Root13.137

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h36.149
SRR8749028MeJA induced 9h31.542
SRR8749029MeJA induced 9h29.730
SRR8749030Uninduced11.728
SRR8749031Uninduced4.871
SRR8749032Uninduced7.125

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.499
SRR8400027Control-Root38.570

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved