Gene detail information of Glyur000050s00005706.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G64060.10respiratory burst oxidase protein F
NRKEH32020.10respiratory burst oxidase-like protein [Medicago truncatula]
COGYP_007146260.17.00E-65putative ferric reductase [Cylindrospermum stagnale PCC 7417]
Swissprottr|O48538|RBOHF_ARATH0Respiratory burst oxidase homolog protein F
trEMBLtr|A0A072V1M2|A0A072V1M2_MEDTR0Respiratory burst oxidase-like protein {ECO:0000313|EMBL:KEH32020.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00050191677196866+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13447RBOH EC:1.6.3.- 1.11.1.- MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


cellular_component

GO:0016020  membrane


molecular_function

GO:0004601  peroxidase activity

GO:0005509  calcium ion binding

GO:0016491  oxidoreductase activity

GO:0050664  oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000050s00005706.1PF08414.5NADPH_Ox761692.90E-14
Glyur000050s00005706.1PF01794.14Ferric_reduct3284841.50E-14
Glyur000050s00005706.1PF08022.7FAD_binding_85356301.70E-10
Glyur000050s00005706.1PF08030.7NAD_binding_66377987.60E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.989
SRR1783600control6.036
SRR1783602moderate drought stress4.627
SRR1811619moderate drought stress4.707

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.387
DRR006520Root Summer glycyrrhizin high producing strain0.275
DRR006521Root Winter glycyrrhizin high producing strain0.045
DRR006522Root Winter glycyrrhizin high producing strain0.044
DRR006523Root Summer glycyrrhizin low producing strain0.149
DRR006524Root Summer glycyrrhizin low producing strain0.118
DRR006525Leaf Summer glycyrrhizin high producing strain0.094
DRR006526Leaf Summer glycyrrhizin high producing strain0.021

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.520
SRR2868004Drought Stress(Tissue:root)23.647
SRR2967015Control (Tissue:root)17.886

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.045
SRR9715740Leave0.023
SRR9715741Leave0.154
SRR9715739Root1.610
SRR9715742Root5.102
SRR9715743Root4.102

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.607
SRR8749028MeJA induced 9h4.710
SRR8749029MeJA induced 9h3.228
SRR8749030Uninduced10.292
SRR8749031Uninduced12.735
SRR8749032Uninduced10.282

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root43.668
SRR8400027Control-Root42.669

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved