Gene detail information of Glyur000050s00005708.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G74250.14.00E-133DNAJ heat shock N-terminal domain-containing protein
NRXP_003524632.10PREDICTED: dnaJ homolog subfamily C member 21-like isoform X1 [Glycine max]
COGYP_006545691.16.00E-13Chaperone protein dnaJ [Methanoculleus bourgensis MS2]
Swissprottr|Q6XL73|DNJ39_ARATH6.00E-12Chaperone protein dnaJ 39
trEMBLtr|K7KMF2|K7KMF2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G00445.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00050200375203152+


Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003676  nucleic acid binding

GO:0008270  zinc ion binding

GO:0046872  metal ion binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000050s00005708.1PF00226.26DnaJ8731.40E-23
Glyur000050s00005708.1PF12171.3zf-C2H2_jaz2983234.10E-11
Glyur000050s00005708.1PF12756.2zf-C2H2_25836110.025


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.832
SRR1783600control13.664
SRR1783602moderate drought stress17.611
SRR1811619moderate drought stress17.317

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.593
DRR006520Root Summer glycyrrhizin high producing strain16.370
DRR006521Root Winter glycyrrhizin high producing strain12.996
DRR006522Root Winter glycyrrhizin high producing strain12.467
DRR006523Root Summer glycyrrhizin low producing strain19.288
DRR006524Root Summer glycyrrhizin low producing strain19.649
DRR006525Leaf Summer glycyrrhizin high producing strain14.440
DRR006526Leaf Summer glycyrrhizin high producing strain14.472

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.863
SRR2868004Drought Stress(Tissue:root)45.350
SRR2967015Control (Tissue:root)39.233

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.438
SRR9715740Leave24.299
SRR9715741Leave26.288
SRR9715739Root1.585
SRR9715742Root16.222
SRR9715743Root12.201

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.666
SRR8749028MeJA induced 9h31.093
SRR8749029MeJA induced 9h20.191
SRR8749030Uninduced23.794
SRR8749031Uninduced36.579
SRR8749032Uninduced21.286

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.438
SRR8400027Control-Root30.728

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved