Gene detail information of Glyur000050s00005731.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G25400.1 | 4.00E-31 | |
| NR | NP_001235962.1 | 6.66E-70 | uncharacterized protein LOC100500294 [Glycine max] |
| COG | YP_133170.1 | 2.00E-29 | hypothetical protein PBPRB1504 [Photobacterium profundum SS9] |
| trEMBL | tr|K7KMH2|K7KMH2_SOYBN | 7.00E-71 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G00750.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00050 | 400811 | 401835 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K16904 | DCTPP1 | EC:3.6.1.12 | Pyrimidine metabolism | map00240 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000050s00005731.1 | PF03819.12 | MazG | 58 | 136 | 5.30E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.787 |
| SRR1783600 | control | 2.474 |
| SRR1783602 | moderate drought stress | 3.145 |
| SRR1811619 | moderate drought stress | 3.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.115 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.842 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.276 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.688 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.408 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 12.118 |
| SRR2868004 | Drought Stress(Tissue:root) | 33.604 |
| SRR2967015 | Control (Tissue:root) | 42.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.180 |
| SRR9715740 | Leave | 0.020 |
| SRR9715741 | Leave | 0.955 |
| SRR9715739 | Root | 0.246 |
| SRR9715742 | Root | 0.086 |
| SRR9715743 | Root | 0.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.132 |
| SRR8749028 | MeJA induced 9h | 0.145 |
| SRR8749029 | MeJA induced 9h | 0.359 |
| SRR8749030 | Uninduced | 1.967 |
| SRR8749031 | Uninduced | 0.858 |
| SRR8749032 | Uninduced | 2.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.548 |
| SRR8400027 | Control-Root | 1.063 |