Gene detail information of Glyur000050s00005734.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G74360.10Leucine-rich repeat protein kinase family protein
NRXP_004508707.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360-like [Cicer arietinum]
COGYP_001192956.11.00E-43two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|C0LGJ1|Y1743_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At1g74360 (Precursor)
trEMBLtr|V7CDB2|V7CDB2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW27265.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00050417232421465-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000050s00005734.1PF08263.7LRRNT_231741.80E-06
Glyur000050s00005734.1PF13516.1LRR_61481670.44
Glyur000050s00005734.1PF13855.1LRR_81752121.30E-07
Glyur000050s00005734.1PF13516.1LRR_62462621.1
Glyur000050s00005734.1PF00560.28LRR_13693900.27
Glyur000050s00005734.1PF00560.28LRR_13934150.26
Glyur000050s00005734.1PF13855.1LRR_84174766.90E-07
Glyur000050s00005734.1PF00069.20Pkinase80610782.10E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.643
SRR1783600control0.655
SRR1783602moderate drought stress0.707
SRR1811619moderate drought stress0.696

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.442
DRR006520Root Summer glycyrrhizin high producing strain8.382
DRR006521Root Winter glycyrrhizin high producing strain5.419
DRR006522Root Winter glycyrrhizin high producing strain5.304
DRR006523Root Summer glycyrrhizin low producing strain18.747
DRR006524Root Summer glycyrrhizin low producing strain18.673
DRR006525Leaf Summer glycyrrhizin high producing strain3.366
DRR006526Leaf Summer glycyrrhizin high producing strain3.262

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.300
SRR2868004Drought Stress(Tissue:root)24.676
SRR2967015Control (Tissue:root)21.775

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.146
SRR9715740Leave5.038
SRR9715741Leave22.089
SRR9715739Root8.556
SRR9715742Root31.118
SRR9715743Root25.210

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.760
SRR8749028MeJA induced 9h96.832
SRR8749029MeJA induced 9h57.604
SRR8749030Uninduced68.615
SRR8749031Uninduced134.487
SRR8749032Uninduced84.271

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.481
SRR8400027Control-Root9.024

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved