Gene detail information of Glyur000050s00005740.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G18670.10Protein kinase superfamily protein
NRXP_004508714.10PREDICTED: probable serine/threonine-protein kinase At1g09600-like [Cicer arietinum]
COGYP_003371239.15.00E-22serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprottr|Q9ZVM9|Y1461_ARATH4.00E-177Probable serine/threonine-protein kinase At1g54610
trEMBLtr|I1JZM1|I1JZM1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G00810.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00050444474450688-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000050s00005740.1PF00069.20Pkinase1003831.10E-62


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.999
SRR1783600control9.753
SRR1783602moderate drought stress8.427
SRR1811619moderate drought stress7.461

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.305
DRR006520Root Summer glycyrrhizin high producing strain16.115
DRR006521Root Winter glycyrrhizin high producing strain1.437
DRR006522Root Winter glycyrrhizin high producing strain2.352
DRR006523Root Summer glycyrrhizin low producing strain11.414
DRR006524Root Summer glycyrrhizin low producing strain11.457
DRR006525Leaf Summer glycyrrhizin high producing strain12.007
DRR006526Leaf Summer glycyrrhizin high producing strain11.973

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.352
SRR2868004Drought Stress(Tissue:root)15.547
SRR2967015Control (Tissue:root)12.483

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.337
SRR9715740Leave9.015
SRR9715741Leave3.414
SRR9715739Root2.257
SRR9715742Root4.871
SRR9715743Root4.257

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.422
SRR8749028MeJA induced 9h12.302
SRR8749029MeJA induced 9h7.839
SRR8749030Uninduced1.188
SRR8749031Uninduced0.481
SRR8749032Uninduced1.100

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.346
SRR8400027Control-Root16.429

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved