Gene detail information of Glyur000051s00003380.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G76680.17.00E-4012-oxophytodienoate reductase 1
NRXP_004511386.11.74E-59PREDICTED: 12-oxophytodienoate reductase 2-like [Cicer arietinum]
COGYP_769012.18.00E-22glycerol trinitrate reductase [Rhizobium leguminosarum bv. viciae 3841]
Swissprottr|Q9XG54|OPR1_SOLLC2.00E-4812-oxophytodienoate reductase 1
trEMBLtr|G7K3S4|G7K3S4_MEDTR5.00E-5912-oxophytodienoate reductase-like protein {ECO:0000313|EMBL:AES93727.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0005142375412+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05894OPR EC:1.3.1.42 alpha-Linolenic acid metabolism map00592


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0010181  FMN binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000051s00003380.1PF00724.15Oxidored_FMN761223.70E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.582
SRR1783600control1.869
SRR1783602moderate drought stress3.260
SRR1811619moderate drought stress3.197

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.619
DRR006520Root Summer glycyrrhizin high producing strain2.049
DRR006521Root Winter glycyrrhizin high producing strain8.153
DRR006522Root Winter glycyrrhizin high producing strain6.430
DRR006523Root Summer glycyrrhizin low producing strain1.498
DRR006524Root Summer glycyrrhizin low producing strain1.835
DRR006525Leaf Summer glycyrrhizin high producing strain1.746
DRR006526Leaf Summer glycyrrhizin high producing strain2.389

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.097
SRR2868004Drought Stress(Tissue:root)0.155
SRR2967015Control (Tissue:root)0.000

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.224
SRR9715740Leave1.125
SRR9715741Leave0.371
SRR9715739Root0.435
SRR9715742Root0.874
SRR9715743Root1.030

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.152
SRR8749028MeJA induced 9h0.147
SRR8749029MeJA induced 9h0.236
SRR8749030Uninduced0.074
SRR8749031Uninduced0.198
SRR8749032Uninduced0.889

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.766
SRR8400027Control-Root3.035

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved