Gene detail information of Glyur000051s00003381.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G76690.15.00E-17612-oxophytodienoate reductase 2
NRXP_003610769.1012-oxophytodienoate reductase [Medicago truncatula]
COGYP_007124434.12.00E-117NADH:flavin oxidoreductase [Microcoleus sp. PCC 7113]
Swissprottr|Q8GYB8|OPR2_ARATH012-oxophytodienoate reductase 2
trEMBLtr|G7K3S4|G7K3S4_MEDTR012-oxophytodienoate reductase-like protein {ECO:0000313|EMBL:AES93727.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00051726011016+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05894OPR EC:1.3.1.42 alpha-Linolenic acid metabolism map00592


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0010181  FMN binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000051s00003381.1PF00724.15Oxidored_FMN93411.60E-88


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.453
SRR1783600control1.668
SRR1783602moderate drought stress0.906
SRR1811619moderate drought stress0.904

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.570
DRR006520Root Summer glycyrrhizin high producing strain1.074
DRR006521Root Winter glycyrrhizin high producing strain1.297
DRR006522Root Winter glycyrrhizin high producing strain1.241
DRR006523Root Summer glycyrrhizin low producing strain9.160
DRR006524Root Summer glycyrrhizin low producing strain9.230
DRR006525Leaf Summer glycyrrhizin high producing strain29.531
DRR006526Leaf Summer glycyrrhizin high producing strain29.723

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.608
SRR2868004Drought Stress(Tissue:root)1.069
SRR2967015Control (Tissue:root)0.662

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.454
SRR9715740Leave53.188
SRR9715741Leave50.850
SRR9715739Root1.122
SRR9715742Root2.991
SRR9715743Root2.599

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.771
SRR8749028MeJA induced 9h1.142
SRR8749029MeJA induced 9h1.172
SRR8749030Uninduced1.014
SRR8749031Uninduced0.706
SRR8749032Uninduced1.499

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.670
SRR8400027Control-Root5.241

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved