Gene detail information of Glyur000051s00003403.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G17900.17.00E-68PLATZ transcription factor family protein
NRXP_003537704.17.68E-118PREDICTED: uncharacterized protein LOC100792668 isoform X1 [Glycine max]
trEMBLtr|I1LFX0|I1LFX0_SOYBN3.00E-118Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G01100.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000519780499746+


Gene family

Gene familysubfamily
Transcription Factors FamilyPLATZ


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000051s00003403.1PF04640.9PLATZ851561.00E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.942
SRR1783600control16.748
SRR1783602moderate drought stress26.053
SRR1811619moderate drought stress26.759

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.152
DRR006520Root Summer glycyrrhizin high producing strain25.382
DRR006521Root Winter glycyrrhizin high producing strain10.425
DRR006522Root Winter glycyrrhizin high producing strain10.230
DRR006523Root Summer glycyrrhizin low producing strain23.957
DRR006524Root Summer glycyrrhizin low producing strain23.349
DRR006525Leaf Summer glycyrrhizin high producing strain6.531
DRR006526Leaf Summer glycyrrhizin high producing strain6.341

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)38.033
SRR2868004Drought Stress(Tissue:root)90.817
SRR2967015Control (Tissue:root)60.110

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.052
SRR9715740Leave25.234
SRR9715741Leave30.711
SRR9715739Root5.687
SRR9715742Root16.101
SRR9715743Root11.431

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.027
SRR8749028MeJA induced 9h97.839
SRR8749029MeJA induced 9h33.622
SRR8749030Uninduced114.030
SRR8749031Uninduced194.742
SRR8749032Uninduced183.619

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root58.914
SRR8400027Control-Root35.148

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved