Gene detail information of Glyur000051s00003410.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G02940.1 | 2.00E-62 | myb domain protein 107 |
| NR | XP_006573852.1 | 7.40E-128 | PREDICTED: transcription factor MYB39-like [Glycine max] |
| Swissprot | tr|Q8GWP0|MYB39_ARATH | 1.00E-68 | Transcription factor MYB39 |
| trEMBL | tr|K7K5G4|K7K5G4_SOYBN | 3.00E-128 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G44370.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00051 | 133740 | 135038 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000051s00003410.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 3.90E-16 |
| Glyur000051s00003410.1 | PF00249.26 | Myb_DNA-binding | 67 | 112 | 2.70E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.341 |
| SRR1783600 | control | 7.367 |
| SRR1783602 | moderate drought stress | 5.985 |
| SRR1811619 | moderate drought stress | 5.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.122 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.307 |
| SRR2967015 | Control (Tissue:root) | 3.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 2.249 |
| SRR9715742 | Root | 1.920 |
| SRR9715743 | Root | 1.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.132 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.216 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 15.892 |
| SRR8400027 | Control-Root | 13.079 |