Gene detail information of Glyur000051s00003412.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G16800.21.00E-92Acyl-CoA N-acyltransferases (NAT) superfamily protein
NRXP_003537743.14.50E-162PREDICTED: histone acetyltransferase MCC1-like isoform X1 [Glycine max]
COGYP_001013176.14.00E-10acetyltransferase [Hyperthermus butylicus DSM 5456]
Swissprottr|Q9M8T9|MCC1_ARATH2.00E-97Histone acetyltransferase MCC1
trEMBLtr|I1LFY4|I1LFY4_SOYBN2.00E-162Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G01170.5}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00051153362157706-


Gene family

Gene familysubfamily
Transcription Factors FamilyGNAT


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0008080  N-acetyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000051s00003412.1PF00583.19Acetyltransf_11602524.40E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.044
SRR1783600control15.168
SRR1783602moderate drought stress14.751
SRR1811619moderate drought stress14.052

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.690
DRR006520Root Summer glycyrrhizin high producing strain22.574
DRR006521Root Winter glycyrrhizin high producing strain16.299
DRR006522Root Winter glycyrrhizin high producing strain18.685
DRR006523Root Summer glycyrrhizin low producing strain31.122
DRR006524Root Summer glycyrrhizin low producing strain31.159
DRR006525Leaf Summer glycyrrhizin high producing strain12.215
DRR006526Leaf Summer glycyrrhizin high producing strain12.390

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.954
SRR2868004Drought Stress(Tissue:root)28.920
SRR2967015Control (Tissue:root)26.144

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.356
SRR9715740Leave14.161
SRR9715741Leave14.061
SRR9715739Root2.610
SRR9715742Root9.834
SRR9715743Root8.664

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.484
SRR8749028MeJA induced 9h27.200
SRR8749029MeJA induced 9h26.799
SRR8749030Uninduced47.583
SRR8749031Uninduced47.191
SRR8749032Uninduced27.593

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.700
SRR8400027Control-Root27.268

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved