Gene detail information of Glyur000051s00003423.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03415.1 | 2.00E-101 | Transcription factor DP |
| NR | XP_004505605.1 | 0 | PREDICTED: transcription factor-like protein DPB-like [Cicer arietinum] |
| Swissprot | tr|Q9FNY2|DPB_ARATH | 3.00E-134 | Transcription factor-like protein DPB |
| trEMBL | tr|I1JAG8|I1JAG8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G43800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00051 | 212227 | 215765 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | E2F-DP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000051s00003423.1 | PF02319.15 | E2F_TDP | 122 | 204 | 3.80E-25 |
| Glyur000051s00003423.1 | PF08781.5 | DP | 211 | 323 | 1.50E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.461 |
| SRR1783600 | control | 40.753 |
| SRR1783602 | moderate drought stress | 56.199 |
| SRR1811619 | moderate drought stress | 55.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 42.202 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 41.088 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 60.821 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 59.050 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 49.905 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 48.852 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.948 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 38.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 50.064 |
| SRR2868004 | Drought Stress(Tissue:root) | 59.396 |
| SRR2967015 | Control (Tissue:root) | 63.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 36.168 |
| SRR9715740 | Leave | 36.907 |
| SRR9715741 | Leave | 47.410 |
| SRR9715739 | Root | 14.627 |
| SRR9715742 | Root | 29.806 |
| SRR9715743 | Root | 28.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 51.146 |
| SRR8749028 | MeJA induced 9h | 57.806 |
| SRR8749029 | MeJA induced 9h | 45.869 |
| SRR8749030 | Uninduced | 39.879 |
| SRR8749031 | Uninduced | 32.627 |
| SRR8749032 | Uninduced | 22.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 56.149 |
| SRR8400027 | Control-Root | 53.270 |