Gene detail information of Glyur000051s00003437.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G08980.12.00E-50Peptidase S24/S26A/S26B/S26C family protein
NRAFK44255.15.67E-101unknown [Lotus japonicus]
COGYP_004174549.13.00E-16signal peptidase I [Anaerolinea thermophila UNI-1]
Swissprottr|Q9M9Z2|TPP2_ARATH7.00E-10Probable thylakoidal processing peptidase 2, chloroplastic (Precursor)
trEMBLtr|I3SVG3|I3SVG3_LOTJA2.00E-101Uncharacterized protein {ECO:0000313|EMBL:AFK44255.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00051299606301510+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09648IMP2 EC:3.4.21.- Protein export map03060


Gene Ontology

biological_process

GO:0006508  proteolysis


cellular_component

GO:0016020  membrane


molecular_function

GO:0008236  serine-type peptidase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000051s00003437.1PF00717.18Peptidase_S24341053.90E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.144
SRR1783600control5.190
SRR1783602moderate drought stress3.190
SRR1811619moderate drought stress2.848

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.494
DRR006520Root Summer glycyrrhizin high producing strain16.078
DRR006521Root Winter glycyrrhizin high producing strain10.124
DRR006522Root Winter glycyrrhizin high producing strain9.422
DRR006523Root Summer glycyrrhizin low producing strain15.357
DRR006524Root Summer glycyrrhizin low producing strain14.349
DRR006525Leaf Summer glycyrrhizin high producing strain14.355
DRR006526Leaf Summer glycyrrhizin high producing strain14.922

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.960
SRR2868004Drought Stress(Tissue:root)21.986
SRR2967015Control (Tissue:root)21.987

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.715
SRR9715740Leave17.236
SRR9715741Leave17.893
SRR9715739Root10.540
SRR9715742Root10.041
SRR9715743Root11.594

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.221
SRR8749028MeJA induced 9h14.827
SRR8749029MeJA induced 9h15.013
SRR8749030Uninduced4.295
SRR8749031Uninduced2.956
SRR8749032Uninduced3.483

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.010
SRR8400027Control-Root19.972

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved