Gene detail information of Glyur000051s00003448.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G33250.1 | 0 | Protein of unknown function (DUF604) |
| NR | XP_003537924.1 | 0 | PREDICTED: uncharacterized protein LOC100819814 [Glycine max] |
| trEMBL | tr|I1LG27|I1LG27_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G01480.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00051 | 353779 | 356161 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000051s00003448.1 | PF04646.7 | DUF604 | 264 | 519 | 2.80E-97 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.629 |
| SRR1783600 | control | 9.738 |
| SRR1783602 | moderate drought stress | 6.101 |
| SRR1811619 | moderate drought stress | 5.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.454 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.602 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.562 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.539 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.148 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.439 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.301 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.420 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.431 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.364 |
| SRR2967015 | Control (Tissue:root) | 5.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.551 |
| SRR9715740 | Leave | 2.805 |
| SRR9715741 | Leave | 2.424 |
| SRR9715739 | Root | 5.909 |
| SRR9715742 | Root | 4.083 |
| SRR9715743 | Root | 4.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.333 |
| SRR8749028 | MeJA induced 9h | 4.046 |
| SRR8749029 | MeJA induced 9h | 3.006 |
| SRR8749030 | Uninduced | 1.023 |
| SRR8749031 | Uninduced | 0.366 |
| SRR8749032 | Uninduced | 0.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.782 |
| SRR8400027 | Control-Root | 6.742 |