Gene detail information of Glyur000052s00005747.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G72540.18.00E-132Protein kinase superfamily protein
NRXP_003627303.10Kinase-like protein [Medicago truncatula]
COGYP_008151634.14.00E-23hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|Q9CAH1|Y1725_ARATH6.00E-177Putative receptor-like protein kinase At1g72540
trEMBLtr|G7L7J3|G7L7J3_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:AET01779.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0005212173582-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000052s00005747.1PF07714.12Pkinase_Tyr793533.30E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.805
SRR1783600control2.722
SRR1783602moderate drought stress0.911
SRR1811619moderate drought stress0.945

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.478
DRR006520Root Summer glycyrrhizin high producing strain0.620
DRR006521Root Winter glycyrrhizin high producing strain3.925
DRR006522Root Winter glycyrrhizin high producing strain3.937
DRR006523Root Summer glycyrrhizin low producing strain0.639
DRR006524Root Summer glycyrrhizin low producing strain0.764
DRR006525Leaf Summer glycyrrhizin high producing strain9.399
DRR006526Leaf Summer glycyrrhizin high producing strain9.388

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.063
SRR2868004Drought Stress(Tissue:root)5.747
SRR2967015Control (Tissue:root)5.311

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave32.707
SRR9715740Leave51.395
SRR9715741Leave54.021
SRR9715739Root0.373
SRR9715742Root1.196
SRR9715743Root0.733

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.535
SRR8749028MeJA induced 9h54.382
SRR8749029MeJA induced 9h29.412
SRR8749030Uninduced14.409
SRR8749031Uninduced10.616
SRR8749032Uninduced6.507

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.142
SRR8400027Control-Root2.940

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved