Gene detail information of Glyur000052s00005811.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G54220.20Dihydrolipoamide acetyltransferase, long form protein
NRXP_003627206.10Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex [Medicago truncatula]
COGYP_003550534.12.00E-125dihydrolipoamide acetyltransferase [Candidatus Puniceispirillum marinum IMCC1322]
Swissprottr|Q5M729|ODP23_ARATH0Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial (Precursor)
trEMBLtr|G7LJ01|G7LJ01_MEDTR0Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00052432874438904-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00627DLAT, aceF, pdhC EC:2.3.1.12 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620


Gene Ontology

biological_process

GO:0006090  pyruvate metabolic process

GO:0008152  metabolic process


cellular_component

GO:0045254  pyruvate dehydrogenase complex


molecular_function

GO:0004742  dihydrolipoyllysine-residue acetyltransferase activity

GO:0016746  transferase activity, transferring acyl groups

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000052s00005811.1PF00364.17Biotin_lipoyl1282001.00E-19
Glyur000052s00005811.1PF02817.12E3_binding2622991.50E-14
Glyur000052s00005811.1PF00198.182-oxoacid_dh3245553.50E-78


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control44.685
SRR1783600control44.618
SRR1783602moderate drought stress35.633
SRR1811619moderate drought stress35.304

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain63.038
DRR006520Root Summer glycyrrhizin high producing strain62.215
DRR006521Root Winter glycyrrhizin high producing strain51.111
DRR006522Root Winter glycyrrhizin high producing strain50.591
DRR006523Root Summer glycyrrhizin low producing strain41.326
DRR006524Root Summer glycyrrhizin low producing strain41.497
DRR006525Leaf Summer glycyrrhizin high producing strain27.517
DRR006526Leaf Summer glycyrrhizin high producing strain27.381

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)117.238
SRR2868004Drought Stress(Tissue:root)79.703
SRR2967015Control (Tissue:root)71.057

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave40.907
SRR9715740Leave35.027
SRR9715741Leave52.242
SRR9715739Root39.703
SRR9715742Root55.701
SRR9715743Root57.693

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h36.608
SRR8749028MeJA induced 9h41.620
SRR8749029MeJA induced 9h29.259
SRR8749030Uninduced21.599
SRR8749031Uninduced18.410
SRR8749032Uninduced15.472

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root83.476
SRR8400027Control-Root69.628

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved