Gene detail information of Glyur000052s00005813.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
NRXP_003545882.10PREDICTED: polyphenol oxidase A1, chloroplastic-like [Glycine max]
Swissprottr|P43309|PPO_MALDO0Polyphenol oxidase, chloroplastic (Precursor)
trEMBLtr|I1MEE6|I1MEE6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G07710.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00052441145442983+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00422E1.10.3.1 EC:1.10.3.1 Tyrosine metabolism map00350
Isoquinoline alkaloid biosynthesismap00950


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0046148  pigment biosynthetic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004097  catechol oxidase activity

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000052s00005813.1PF00264.15Tyrosinase1653791.90E-36
Glyur000052s00005813.1PF12142.3PPO1_DWL3884414.40E-29
Glyur000052s00005813.1PF12143.3PPO1_KFDV4806104.50E-53


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.079
SRR1783600control0.100
SRR1783602moderate drought stress0.139
SRR1811619moderate drought stress0.083

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.389
DRR006520Root Summer glycyrrhizin high producing strain8.487
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain2.453
DRR006524Root Summer glycyrrhizin low producing strain2.453
DRR006525Leaf Summer glycyrrhizin high producing strain94.955
DRR006526Leaf Summer glycyrrhizin high producing strain94.674

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.947
SRR2868004Drought Stress(Tissue:root)1.376
SRR2967015Control (Tissue:root)1.903

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave211.821
SRR9715740Leave131.753
SRR9715741Leave156.402
SRR9715739Root3.363
SRR9715742Root20.793
SRR9715743Root17.419

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.538
SRR8749028MeJA induced 9h0.146
SRR8749029MeJA induced 9h0.297
SRR8749030Uninduced0.000
SRR8749031Uninduced0.278
SRR8749032Uninduced0.093

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.161
SRR8400027Control-Root6.173

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved