Gene detail information of Glyur000052s00005815.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G37510.1 | 2.00E-10 | NADH-ubiquinone dehydrogenase, mitochondrial, putative |
| NR | XP_010032736.1 | 9.21E-11 | PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [Eucalyptus grandis] |
| COG | YP_507428.1 | 1.00E-10 | NADH dehydrogenase subunit G [Ehrlichia chaffeensis str. Arkansas] |
| Swissprot | tr|Q43644|NDUS1_SOLTU | 3.00E-12 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial (Precursor) |
| trEMBL | tr|A0A059ADL6|A0A059ADL6_EUCGR | 3.00E-11 | Uncharacterized protein {ECO:0000313|EMBL:KCW52192.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00052 | 479660 | 481181 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 52.396 |
| SRR1783600 | control | 52.713 |
| SRR1783602 | moderate drought stress | 56.102 |
| SRR1811619 | moderate drought stress | 54.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.770 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.696 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.185 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.181 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.711 |
| SRR9715740 | Leave | 0.848 |
| SRR9715741 | Leave | 2.088 |
| SRR9715739 | Root | 29.112 |
| SRR9715742 | Root | 9.159 |
| SRR9715743 | Root | 15.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 42.672 |
| SRR8400027 | Control-Root | 38.687 |