Gene detail information of Glyur000053s00006421.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15480.1 | 9.00E-143 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003555960.1 | 0 | PREDICTED: limonoid UDP-glucosyltransferase-like [Glycine max] |
| COG | YP_007421411.1 | 1.00E-10 | Glycosyltransferase, MGT [Bacillus thuringiensis serovar kurstaki str. HD73] |
| Swissprot | tr|Q2V6K1|UGT_FRAAN | 0 | Putative UDP-glucose glucosyltransferase |
| trEMBL | tr|I1NFW9|I1NFW9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G26420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00053 | 57378 | 58808 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000053s00006421.1 | PF00201.13 | UDPGT | 244 | 400 | 1.20E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.558 |
| SRR1783600 | control | 17.719 |
| SRR1783602 | moderate drought stress | 15.814 |
| SRR1811619 | moderate drought stress | 15.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.159 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.096 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.784 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.646 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.779 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.859 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 47.581 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 47.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 18.224 |
| SRR2868004 | Drought Stress(Tissue:root) | 19.945 |
| SRR2967015 | Control (Tissue:root) | 14.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 43.126 |
| SRR9715740 | Leave | 46.889 |
| SRR9715741 | Leave | 38.053 |
| SRR9715739 | Root | 33.753 |
| SRR9715742 | Root | 18.687 |
| SRR9715743 | Root | 21.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.136 |
| SRR8749028 | MeJA induced 9h | 4.398 |
| SRR8749029 | MeJA induced 9h | 2.087 |
| SRR8749030 | Uninduced | 8.882 |
| SRR8749031 | Uninduced | 3.433 |
| SRR8749032 | Uninduced | 2.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 26.587 |
| SRR8400027 | Control-Root | 24.730 |