Gene detail information of Glyur000053s00006425.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15480.1 | 2.00E-139 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003555960.1 | 0 | PREDICTED: limonoid UDP-glucosyltransferase-like [Glycine max] |
| COG | YP_007421411.1 | 3.00E-09 | Glycosyltransferase, MGT [Bacillus thuringiensis serovar kurstaki str. HD73] |
| Swissprot | tr|Q9MB73|LGT_CITUN | 0 | Limonoid UDP-glucosyltransferase |
| trEMBL | tr|I1NFW9|I1NFW9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G26420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00053 | 70532 | 71971 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000053s00006425.1 | PF00201.13 | UDPGT | 266 | 399 | 1.60E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.074 |
| SRR1783600 | control | 1.935 |
| SRR1783602 | moderate drought stress | 0.695 |
| SRR1811619 | moderate drought stress | 0.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.075 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.075 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.129 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 14.996 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.663 |
| SRR2967015 | Control (Tissue:root) | 11.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.529 |
| SRR9715740 | Leave | 0.433 |
| SRR9715741 | Leave | 0.336 |
| SRR9715739 | Root | 4.364 |
| SRR9715742 | Root | 1.430 |
| SRR9715743 | Root | 1.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.860 |
| SRR8749028 | MeJA induced 9h | 10.234 |
| SRR8749029 | MeJA induced 9h | 10.319 |
| SRR8749030 | Uninduced | 27.673 |
| SRR8749031 | Uninduced | 24.319 |
| SRR8749032 | Uninduced | 23.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.283 |
| SRR8400027 | Control-Root | 9.831 |