Gene detail information of Glyur000053s00006427.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G49820.11.00E-163S-methyl-5-thioribose kinase
NRKEH44069.10methylthioribose kinase [Medicago truncatula]
COGYP_007513008.11.00E-111putative S-methyl-5-thioribose kinase [Bradyrhizobium oligotrophicum S58]
Swissprottr|Q9C6D2|MTK_ARATH0Methylthioribose kinase
trEMBLtr|A0A072VPX2|A0A072VPX2_MEDTR0Methylthioribose kinase {ECO:0000313|EMBL:KEH44069.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000538049893044+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00899mtnK EC:2.7.1.100 Cysteine and methionine metabolism map00270


Gene Ontology

biological_process

GO:0009086  methionine biosynthetic process


molecular_function

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0046522  S-methyl-5-thioribose kinase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000053s00006427.2PF01636.18APH372901.70E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.878
SRR1783600control19.642
SRR1783602moderate drought stress20.584
SRR1811619moderate drought stress19.615

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.494
DRR006520Root Summer glycyrrhizin high producing strain14.105
DRR006521Root Winter glycyrrhizin high producing strain8.106
DRR006522Root Winter glycyrrhizin high producing strain7.355
DRR006523Root Summer glycyrrhizin low producing strain12.217
DRR006524Root Summer glycyrrhizin low producing strain11.353
DRR006525Leaf Summer glycyrrhizin high producing strain14.994
DRR006526Leaf Summer glycyrrhizin high producing strain15.073

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.649
SRR2868004Drought Stress(Tissue:root)17.330
SRR2967015Control (Tissue:root)12.315

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.835
SRR9715740Leave16.190
SRR9715741Leave17.796
SRR9715739Root15.027
SRR9715742Root23.614
SRR9715743Root20.977

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.277
SRR8749028MeJA induced 9h6.014
SRR8749029MeJA induced 9h3.369
SRR8749030Uninduced5.524
SRR8749031Uninduced1.679
SRR8749032Uninduced0.983

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.506
SRR8400027Control-Root21.712

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved