Gene detail information of Glyur000053s00006436.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24625.1 | 5.00E-17 | zinc finger protein 7 |
| NR | XP_004496912.1 | 4.99E-101 | PREDICTED: zinc finger protein 7-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q39266|ZFP7_ARATH | 2.00E-20 | Zinc finger protein 7 |
| trEMBL | tr|K7N376|K7N376_SOYBN | 2.00E-100 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G26680.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00053 | 126123 | 126722 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.909 |
| SRR1783600 | control | 27.141 |
| SRR1783602 | moderate drought stress | 99.539 |
| SRR1811619 | moderate drought stress | 97.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 52.417 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 51.177 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.285 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.669 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.134 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.527 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.806 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 22.452 |
| SRR2868004 | Drought Stress(Tissue:root) | 57.562 |
| SRR2967015 | Control (Tissue:root) | 117.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.907 |
| SRR9715740 | Leave | 17.366 |
| SRR9715741 | Leave | 9.516 |
| SRR9715739 | Root | 15.837 |
| SRR9715742 | Root | 25.614 |
| SRR9715743 | Root | 17.989 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.186 |
| SRR8749028 | MeJA induced 9h | 0.593 |
| SRR8749029 | MeJA induced 9h | 0.152 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 23.021 |
| SRR8400027 | Control-Root | 34.431 |