Gene detail information of Glyur000054s00005304.3 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28610.1 | 9.00E-85 | phosphate starvation response 1 |
| NR | XP_003554298.1 | 0 | PREDICTED: protein PHR1-LIKE 1-like isoform X1 [Glycine max] |
| Swissprot | tr|Q8GUN5|PHL1_ARATH | 1.00E-85 | Protein PHR1-LIKE 1 |
| trEMBL | tr|I1N9T9|I1N9T9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G35080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00054 | 31390 | 37733 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000054s00005304.3 | PF00249.26 | Myb_DNA-binding | 272 | 323 | 1.50E-15 |
| Glyur000054s00005304.3 | PF14379.1 | Myb_CC_LHEQLE | 354 | 401 | 2.80E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.284 |
| SRR1783600 | control | 31.571 |
| SRR1783602 | moderate drought stress | 38.254 |
| SRR1811619 | moderate drought stress | 37.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.122 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.292 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 53.152 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 50.739 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.635 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.975 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 27.033 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 36.846 |
| SRR2868004 | Drought Stress(Tissue:root) | 44.763 |
| SRR2967015 | Control (Tissue:root) | 49.353 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 29.983 |
| SRR9715740 | Leave | 40.627 |
| SRR9715741 | Leave | 36.798 |
| SRR9715739 | Root | 10.503 |
| SRR9715742 | Root | 30.731 |
| SRR9715743 | Root | 23.783 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.834 |
| SRR8749028 | MeJA induced 9h | 33.608 |
| SRR8749029 | MeJA induced 9h | 26.168 |
| SRR8749030 | Uninduced | 32.636 |
| SRR8749031 | Uninduced | 24.478 |
| SRR8749032 | Uninduced | 31.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 49.746 |
| SRR8400027 | Control-Root | 41.719 |