Gene detail information of Glyur000054s00005317.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G28650.10Leucine-rich repeat transmembrane protein kinase family protein
NRXP_007162602.10hypothetical protein PHAVU_001G165100g [Phaseolus vulgaris]
COGYP_004775215.11.00E-59RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9M0G7|PXL2_ARATH0Leucine-rich repeat receptor-like protein kinase PXL2 (Precursor)
trEMBLtr|V7D099|V7D099_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW34596.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0005499913103215-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000054s00005317.1PF08263.7LRRNT_232781.20E-10
Glyur000054s00005317.1PF13855.1LRR_81772361.30E-06
Glyur000054s00005317.1PF12799.2LRR_42973341.90E-07
Glyur000054s00005317.1PF13516.1LRR_63693910.9
Glyur000054s00005317.1PF13855.1LRR_84174761.50E-06
Glyur000054s00005317.1PF13855.1LRR_84895492.90E-09
Glyur000054s00005317.1PF00560.28LRR_15655820.26
Glyur000054s00005317.1PF00069.20Pkinase7168071.40E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.869
SRR1783600control5.721
SRR1783602moderate drought stress3.947
SRR1811619moderate drought stress4.019

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.190
DRR006520Root Summer glycyrrhizin high producing strain2.079
DRR006521Root Winter glycyrrhizin high producing strain0.401
DRR006522Root Winter glycyrrhizin high producing strain0.369
DRR006523Root Summer glycyrrhizin low producing strain1.478
DRR006524Root Summer glycyrrhizin low producing strain1.454
DRR006525Leaf Summer glycyrrhizin high producing strain0.163
DRR006526Leaf Summer glycyrrhizin high producing strain0.196

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.428
SRR2868004Drought Stress(Tissue:root)12.159
SRR2967015Control (Tissue:root)12.288

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.639
SRR9715740Leave0.193
SRR9715741Leave0.246
SRR9715739Root0.986
SRR9715742Root2.960
SRR9715743Root1.801

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.654
SRR8749028MeJA induced 9h0.190
SRR8749029MeJA induced 9h0.331
SRR8749030Uninduced0.020
SRR8749031Uninduced0.001
SRR8749032Uninduced0.040

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.459
SRR8400027Control-Root8.198

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved