Gene detail information of Glyur000055s00004538.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G09020.10homolog of yeast sucrose nonfermenting 4
NRXP_004508285.10PREDICTED: sucrose nonfermenting 4-like protein-like [Cicer arietinum]
Swissprottr|Q944A6|SNF4_ARATH0Sucrose nonfermenting 4-like protein
trEMBLtr|G7JKB3|G7JKB3_MEDTR0Sucrose nonfermenting-like protein {ECO:0000313|EMBL:AES91833.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00055103820112053+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM48


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000055s00004538.1PF00571.23CBS1772250.0002
Glyur000055s00004538.1PF00571.23CBS2583135.70E-06
Glyur000055s00004538.1PF00571.23CBS3473920.00012
Glyur000055s00004538.1PF00571.23CBS4314803.30E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.419
SRR1783600control16.332
SRR1783602moderate drought stress21.597
SRR1811619moderate drought stress21.505

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.747
DRR006520Root Summer glycyrrhizin high producing strain17.648
DRR006521Root Winter glycyrrhizin high producing strain18.010
DRR006522Root Winter glycyrrhizin high producing strain17.756
DRR006523Root Summer glycyrrhizin low producing strain17.815
DRR006524Root Summer glycyrrhizin low producing strain17.735
DRR006525Leaf Summer glycyrrhizin high producing strain15.725
DRR006526Leaf Summer glycyrrhizin high producing strain15.573

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)44.065
SRR2868004Drought Stress(Tissue:root)42.153
SRR2967015Control (Tissue:root)37.871

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.925
SRR9715740Leave31.169
SRR9715741Leave31.814
SRR9715739Root16.715
SRR9715742Root23.709
SRR9715743Root22.208

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h28.547
SRR8749028MeJA induced 9h28.075
SRR8749029MeJA induced 9h20.187
SRR8749030Uninduced32.780
SRR8749031Uninduced21.504
SRR8749032Uninduced32.276

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.608
SRR8400027Control-Root36.349

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved