Gene detail information of Glyur000055s00004556.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G18610.20Protein kinase superfamily protein
NRXP_006597536.10PREDICTED: serine/threonine-protein kinase PBS1-like [Glycine max]
COGNP_864467.13.00E-25serine/threonine-protein kinase pknA [Rhodopirellula baltica SH 1]
Swissprottr|Q9FE20|PBS1_ARATH0Serine/threonine-protein kinase PBS1
trEMBLtr|I1MF55|I1MF55_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G10360.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00055227568232060+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000055s00004556.1PF00069.20Pkinase943563.70E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.071
SRR1783600control16.202
SRR1783602moderate drought stress16.045
SRR1811619moderate drought stress15.717

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.615
DRR006520Root Summer glycyrrhizin high producing strain16.793
DRR006521Root Winter glycyrrhizin high producing strain13.737
DRR006522Root Winter glycyrrhizin high producing strain13.197
DRR006523Root Summer glycyrrhizin low producing strain14.331
DRR006524Root Summer glycyrrhizin low producing strain14.806
DRR006525Leaf Summer glycyrrhizin high producing strain7.903
DRR006526Leaf Summer glycyrrhizin high producing strain7.689

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.992
SRR2868004Drought Stress(Tissue:root)26.919
SRR2967015Control (Tissue:root)22.851

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.596
SRR9715740Leave17.839
SRR9715741Leave23.594
SRR9715739Root14.182
SRR9715742Root20.278
SRR9715743Root19.927

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.148
SRR8749028MeJA induced 9h19.982
SRR8749029MeJA induced 9h12.015
SRR8749030Uninduced10.270
SRR8749031Uninduced8.353
SRR8749032Uninduced4.464

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.272
SRR8400027Control-Root19.972

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved