Gene detail information of Glyur000055s00004570.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G54610.3 | 0 | Protein kinase superfamily protein |
| NR | KHN03005.1 | 0 | Putative serine/threonine-protein kinase [Glycine soja] |
| COG | YP_004179287.1 | 3.00E-19 | serine/threonine protein kinase [Isosphaera pallida ATCC 43644] |
| Swissprot | tr|Q9ZVM9|Y1461_ARATH | 0 | Probable serine/threonine-protein kinase At1g54610 |
| trEMBL | tr|I1KN33|I1KN33_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G38140.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00055 | 301341 | 306242 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.5.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000055s00004570.1 | PF00069.20 | Pkinase | 99 | 355 | 1.40E-47 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.901 |
| SRR1783600 | control | 4.950 |
| SRR1783602 | moderate drought stress | 1.704 |
| SRR1811619 | moderate drought stress | 1.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.270 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.385 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.395 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.304 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.723 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.693 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.081 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 19.414 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.305 |
| SRR2967015 | Control (Tissue:root) | 16.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.270 |
| SRR9715740 | Leave | 3.127 |
| SRR9715741 | Leave | 2.360 |
| SRR9715739 | Root | 1.816 |
| SRR9715742 | Root | 4.798 |
| SRR9715743 | Root | 4.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.838 |
| SRR8749028 | MeJA induced 9h | 10.411 |
| SRR8749029 | MeJA induced 9h | 5.948 |
| SRR8749030 | Uninduced | 3.092 |
| SRR8749031 | Uninduced | 2.335 |
| SRR8749032 | Uninduced | 1.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 16.336 |
| SRR8400027 | Control-Root | 19.147 |